Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 AA386476-201ENSMUST00000098781 1665 ntBASIC18.76■□□□□ 0.59
Cdkn2bP55271 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cdkn2bP55271 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn2bP55271 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.74■□□□□ 0.59
Cdkn2bP55271 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.74■□□□□ 0.59
Cdkn2bP55271 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Cdkn2bP55271 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn2bP55271 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.73■□□□□ 0.59
Cdkn2bP55271 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.73■□□□□ 0.59
Cdkn2bP55271 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdkn2bP55271 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.72■□□□□ 0.59
Cdkn2bP55271 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.72■□□□□ 0.59
Cdkn2bP55271 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn2bP55271 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Cdkn2bP55271 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Gm7417-201ENSMUST00000192950 473 ntBASIC18.71■□□□□ 0.59
Cdkn2bP55271 Gm15820-201ENSMUST00000201566 728 ntBASIC18.71■□□□□ 0.59
Cdkn2bP55271 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn2bP55271 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdkn2bP55271 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.7■□□□□ 0.58
Cdkn2bP55271 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn2bP55271 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkn2bP55271 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.68■□□□□ 0.58
Cdkn2bP55271 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.68■□□□□ 0.58
Cdkn2bP55271 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.68■□□□□ 0.58
Cdkn2bP55271 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2bP55271 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdkn2bP55271 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn2bP55271 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn2bP55271 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms