Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.94■□□□□ 0.94
NcanP55066 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Rab3c-203ENSMUST00000224180 967 ntBASIC20.94■□□□□ 0.94
NcanP55066 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NcanP55066 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NcanP55066 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NcanP55066 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NcanP55066 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NcanP55066 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.92■□□□□ 0.94
NcanP55066 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NcanP55066 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NcanP55066 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NcanP55066 Gm715-201ENSMUST00000117865 831 ntBASIC20.92■□□□□ 0.94
NcanP55066 Gm15565-201ENSMUST00000118890 427 ntBASIC20.92■□□□□ 0.94
NcanP55066 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NcanP55066 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.92■□□□□ 0.94
NcanP55066 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NcanP55066 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NcanP55066 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NcanP55066 Gm12896-201ENSMUST00000118430 226 ntBASIC20.91■□□□□ 0.94
NcanP55066 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NcanP55066 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NcanP55066 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NcanP55066 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NcanP55066 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.9■□□□□ 0.94
NcanP55066 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NcanP55066 Gm5643-201ENSMUST00000117081 966 ntBASIC20.9■□□□□ 0.94
NcanP55066 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NcanP55066 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NcanP55066 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NcanP55066 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NcanP55066 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NcanP55066 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.89■□□□□ 0.93
NcanP55066 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.89■□□□□ 0.93
NcanP55066 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.89■□□□□ 0.93
NcanP55066 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.89■□□□□ 0.93
NcanP55066 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NcanP55066 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.88■□□□□ 0.93
NcanP55066 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.88■□□□□ 0.93
NcanP55066 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.88■□□□□ 0.93
NcanP55066 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NcanP55066 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NcanP55066 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NcanP55066 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.87■□□□□ 0.93
NcanP55066 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NcanP55066 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
NcanP55066 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NcanP55066 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.86■□□□□ 0.93
NcanP55066 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.86■□□□□ 0.93
NcanP55066 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NcanP55066 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NcanP55066 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NcanP55066 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NcanP55066 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NcanP55066 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NcanP55066 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.85■□□□□ 0.93
NcanP55066 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NcanP55066 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NcanP55066 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.84■□□□□ 0.93
NcanP55066 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NcanP55066 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.84■□□□□ 0.93
NcanP55066 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms