Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.9■■□□□ 1.1
Hmgcs2P54869 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.9■■□□□ 1.1
Hmgcs2P54869 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Hmgcs2P54869 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmgcs2P54869 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.89■■□□□ 1.1
Hmgcs2P54869 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmgcs2P54869 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmgcs2P54869 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.89■■□□□ 1.09
Hmgcs2P54869 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcs2P54869 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcs2P54869 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcs2P54869 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmgcs2P54869 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.89■■□□□ 1.09
Hmgcs2P54869 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Gm13148-201ENSMUST00000118892 745 ntBASIC21.88■■□□□ 1.09
Hmgcs2P54869 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Gm6420-201ENSMUST00000193885 723 ntBASIC21.88■■□□□ 1.09
Hmgcs2P54869 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.88■■□□□ 1.09
Hmgcs2P54869 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs2P54869 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.87■■□□□ 1.09
Hmgcs2P54869 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.87■■□□□ 1.09
Hmgcs2P54869 AA386476-201ENSMUST00000098781 1665 ntBASIC21.87■■□□□ 1.09
Hmgcs2P54869 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.87■■□□□ 1.09
Hmgcs2P54869 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs2P54869 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.86■■□□□ 1.09
Hmgcs2P54869 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgcs2P54869 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgcs2P54869 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.86■■□□□ 1.09
Hmgcs2P54869 Gm6365-201ENSMUST00000054711 744 ntBASIC21.86■■□□□ 1.09
Hmgcs2P54869 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.86■■□□□ 1.09
Hmgcs2P54869 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Hmgcs2P54869 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs2P54869 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.84■■□□□ 1.09
Hmgcs2P54869 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hmgcs2P54869 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgcs2P54869 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Hmgcs2P54869 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.83■■□□□ 1.09
Hmgcs2P54869 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.83■■□□□ 1.09
Hmgcs2P54869 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.83■■□□□ 1.09
Hmgcs2P54869 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Hmgcs2P54869 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Hmgcs2P54869 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hmgcs2P54869 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs2P54869 Gm7290-201ENSMUST00000104990 617 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Gm12918-201ENSMUST00000120234 636 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Gm15710-201ENSMUST00000121821 636 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs2P54869 Gm5075-201ENSMUST00000196916 622 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.82■■□□□ 1.08
Hmgcs2P54869 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.82■■□□□ 1.08
Hmgcs2P54869 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs2P54869 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs2P54869 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs2P54869 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms