Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.39■□□□□ 0.69
Atxn1P54254 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.39■□□□□ 0.69
Atxn1P54254 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Atxn1P54254 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.39■□□□□ 0.69
Atxn1P54254 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.38■□□□□ 0.69
Atxn1P54254 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.38■□□□□ 0.69
Atxn1P54254 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn1P54254 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Atxn1P54254 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.38■□□□□ 0.69
Atxn1P54254 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn1P54254 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn1P54254 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.37■□□□□ 0.69
Atxn1P54254 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Atxn1P54254 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.37■□□□□ 0.69
Atxn1P54254 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.37■□□□□ 0.69
Atxn1P54254 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.37■□□□□ 0.69
Atxn1P54254 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Atxn1P54254 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Atxn1P54254 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn1P54254 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.36■□□□□ 0.69
Atxn1P54254 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Atxn1P54254 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn1P54254 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn1P54254 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn1P54254 Mir6982-201ENSMUST00000184354 68 ntBASIC19.36■□□□□ 0.69
Atxn1P54254 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Atxn1P54254 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn1P54254 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atxn1P54254 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn1P54254 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn1P54254 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.35■□□□□ 0.69
Atxn1P54254 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atxn1P54254 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn1P54254 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn1P54254 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.35■□□□□ 0.69
Atxn1P54254 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn1P54254 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atxn1P54254 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
Atxn1P54254 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Atxn1P54254 Gm10812-201ENSMUST00000099864 546 ntBASIC19.34■□□□□ 0.69
Atxn1P54254 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atxn1P54254 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atxn1P54254 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.33■□□□□ 0.68
Atxn1P54254 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn1P54254 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn1P54254 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn1P54254 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Atxn1P54254 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn1P54254 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atxn1P54254 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.33■□□□□ 0.68
Atxn1P54254 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Atxn1P54254 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Atxn1P54254 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atxn1P54254 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atxn1P54254 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.31■□□□□ 0.68
Atxn1P54254 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.31■□□□□ 0.68
Atxn1P54254 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atxn1P54254 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms