Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lbx1P52955 Gm10698-201ENSMUST00000182663 604 ntBASIC19.02■□□□□ 0.64
Lbx1P52955 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.02■□□□□ 0.64
Lbx1P52955 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lbx1P52955 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lbx1P52955 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lbx1P52955 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lbx1P52955 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lbx1P52955 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lbx1P52955 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.02■□□□□ 0.64
Lbx1P52955 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lbx1P52955 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lbx1P52955 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lbx1P52955 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lbx1P52955 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lbx1P52955 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lbx1P52955 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.01■□□□□ 0.63
Lbx1P52955 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lbx1P52955 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lbx1P52955 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lbx1P52955 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.01■□□□□ 0.63
Lbx1P52955 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lbx1P52955 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lbx1P52955 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lbx1P52955 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.99■□□□□ 0.63
Lbx1P52955 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lbx1P52955 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Gm6659-201ENSMUST00000174752 547 ntBASIC18.99■□□□□ 0.63
Lbx1P52955 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Lbx1P52955 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lbx1P52955 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Lbx1P52955 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.98■□□□□ 0.63
Lbx1P52955 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.98■□□□□ 0.63
Lbx1P52955 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.98■□□□□ 0.63
Lbx1P52955 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lbx1P52955 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lbx1P52955 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.98■□□□□ 0.63
Lbx1P52955 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Lbx1P52955 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lbx1P52955 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.97■□□□□ 0.63
Lbx1P52955 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Lbx1P52955 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lbx1P52955 Gm5417-201ENSMUST00000079706 384 ntBASIC18.97■□□□□ 0.63
Lbx1P52955 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lbx1P52955 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lbx1P52955 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.97■□□□□ 0.63
Lbx1P52955 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lbx1P52955 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lbx1P52955 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lbx1P52955 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lbx1P52955 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lbx1P52955 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lbx1P52955 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lbx1P52955 Gm2559-201ENSMUST00000201323 363 ntBASIC18.96■□□□□ 0.63
Lbx1P52955 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Lbx1P52955 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.96■□□□□ 0.63
Lbx1P52955 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.96■□□□□ 0.63
Lbx1P52955 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lbx1P52955 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.96■□□□□ 0.63
Lbx1P52955 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lbx1P52955 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.95■□□□□ 0.62
Lbx1P52955 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms