Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl5P50228 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cxcl5P50228 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.91■□□□□ 0.3
Cxcl5P50228 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl5P50228 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.91■□□□□ 0.3
Cxcl5P50228 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cxcl5P50228 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cxcl5P50228 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.9■□□□□ 0.3
Cxcl5P50228 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl5P50228 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cxcl5P50228 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl5P50228 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Cxcl5P50228 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl5P50228 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.89■□□□□ 0.29
Cxcl5P50228 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl5P50228 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl5P50228 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.88■□□□□ 0.29
Cxcl5P50228 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.88■□□□□ 0.29
Cxcl5P50228 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.88■□□□□ 0.29
Cxcl5P50228 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.88■□□□□ 0.29
Cxcl5P50228 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.88■□□□□ 0.29
Cxcl5P50228 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.88■□□□□ 0.29
Cxcl5P50228 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl5P50228 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.87■□□□□ 0.29
Cxcl5P50228 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cxcl5P50228 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.87■□□□□ 0.29
Cxcl5P50228 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.87■□□□□ 0.29
Cxcl5P50228 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl5P50228 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cxcl5P50228 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.86■□□□□ 0.29
Cxcl5P50228 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cxcl5P50228 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.86■□□□□ 0.29
Cxcl5P50228 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl5P50228 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.85■□□□□ 0.29
Cxcl5P50228 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Etf1-202ENSMUST00000180351 108 ntBASIC16.85■□□□□ 0.29
Cxcl5P50228 Gm7417-201ENSMUST00000192950 473 ntBASIC16.85■□□□□ 0.29
Cxcl5P50228 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.85■□□□□ 0.29
Cxcl5P50228 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl5P50228 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms