Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.02■□□□□ 0.32
GdnfP48540 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GdnfP48540 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GdnfP48540 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GdnfP48540 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GdnfP48540 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GdnfP48540 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GdnfP48540 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.01■□□□□ 0.31
GdnfP48540 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GdnfP48540 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
GdnfP48540 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GdnfP48540 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17■□□□□ 0.31
GdnfP48540 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GdnfP48540 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17■□□□□ 0.31
GdnfP48540 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17■□□□□ 0.31
GdnfP48540 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
GdnfP48540 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GdnfP48540 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.99■□□□□ 0.31
GdnfP48540 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.99■□□□□ 0.31
GdnfP48540 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.99■□□□□ 0.31
GdnfP48540 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GdnfP48540 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GdnfP48540 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GdnfP48540 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GdnfP48540 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GdnfP48540 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GdnfP48540 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GdnfP48540 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Gm22238-201ENSMUST00000175222 88 ntBASIC16.97■□□□□ 0.31
GdnfP48540 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.97■□□□□ 0.31
GdnfP48540 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GdnfP48540 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GdnfP48540 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
GdnfP48540 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
GdnfP48540 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.96■□□□□ 0.31
GdnfP48540 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
GdnfP48540 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GdnfP48540 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.96■□□□□ 0.31
GdnfP48540 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
GdnfP48540 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GdnfP48540 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
GdnfP48540 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GdnfP48540 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GdnfP48540 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GdnfP48540 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.95■□□□□ 0.3
GdnfP48540 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GdnfP48540 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GdnfP48540 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GdnfP48540 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GdnfP48540 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GdnfP48540 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GdnfP48540 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.94■□□□□ 0.3
GdnfP48540 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GdnfP48540 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms