Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox6P40645 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox6P40645 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox6P40645 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox6P40645 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox6P40645 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox6P40645 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sox6P40645 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox6P40645 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.26■□□□□ 0.51
Sox6P40645 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Sox6P40645 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.25■□□□□ 0.51
Sox6P40645 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.25■□□□□ 0.51
Sox6P40645 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox6P40645 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sox6P40645 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.24■□□□□ 0.51
Sox6P40645 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sox6P40645 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.24■□□□□ 0.51
Sox6P40645 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox6P40645 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Sox6P40645 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Sox6P40645 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.23■□□□□ 0.51
Sox6P40645 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.23■□□□□ 0.51
Sox6P40645 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.23■□□□□ 0.51
Sox6P40645 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sox6P40645 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox6P40645 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Sox6P40645 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sox6P40645 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox6P40645 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Sox6P40645 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.21■□□□□ 0.51
Sox6P40645 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Sox6P40645 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox6P40645 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Sox6P40645 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sox6P40645 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox6P40645 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Sox6P40645 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.19■□□□□ 0.5
Sox6P40645 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
Sox6P40645 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sox6P40645 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.19■□□□□ 0.5
Sox6P40645 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox6P40645 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Sox6P40645 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sox6P40645 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox6P40645 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sox6P40645 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox6P40645 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox6P40645 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sox6P40645 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox6P40645 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox6P40645 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox6P40645 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms