Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slc6a11P31650 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Slc6a11P31650 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Slc6a11P31650 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a11P31650 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Slc6a11P31650 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a11P31650 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a11P31650 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Slc6a11P31650 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a11P31650 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a11P31650 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a11P31650 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.47■□□□□ 0.55
Slc6a11P31650 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc6a11P31650 Gm18284-201ENSMUST00000172604 624 ntBASIC18.47■□□□□ 0.55
Slc6a11P31650 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.47■□□□□ 0.55
Slc6a11P31650 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Slc6a11P31650 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a11P31650 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Slc6a11P31650 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Slc6a11P31650 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a11P31650 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Slc6a11P31650 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc6a11P31650 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc6a11P31650 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Slc6a11P31650 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.45■□□□□ 0.54
Slc6a11P31650 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Slc6a11P31650 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc6a11P31650 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc6a11P31650 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a11P31650 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.44■□□□□ 0.54
Slc6a11P31650 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.44■□□□□ 0.54
Slc6a11P31650 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a11P31650 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a11P31650 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms