Protein–RNA interactions for Protein: P27545

Cers1, Ceramide synthase 1, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cers1P27545 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cers1P27545 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cers1P27545 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Cers1P27545 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cers1P27545 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cers1P27545 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.2■□□□□ 0.5
Cers1P27545 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.2■□□□□ 0.5
Cers1P27545 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.2■□□□□ 0.5
Cers1P27545 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cers1P27545 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cers1P27545 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.19■□□□□ 0.5
Cers1P27545 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Cers1P27545 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cers1P27545 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.19■□□□□ 0.5
Cers1P27545 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cers1P27545 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cers1P27545 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cers1P27545 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cers1P27545 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cers1P27545 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cers1P27545 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.19■□□□□ 0.5
Cers1P27545 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cers1P27545 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.18■□□□□ 0.5
Cers1P27545 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cers1P27545 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cers1P27545 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cers1P27545 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.17■□□□□ 0.5
Cers1P27545 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.17■□□□□ 0.5
Cers1P27545 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.17■□□□□ 0.5
Cers1P27545 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.17■□□□□ 0.5
Cers1P27545 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.17■□□□□ 0.5
Cers1P27545 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cers1P27545 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.17■□□□□ 0.5
Cers1P27545 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cers1P27545 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cers1P27545 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cers1P27545 Mir7075-201ENSMUST00000184187 82 ntBASIC18.16■□□□□ 0.5
Cers1P27545 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cers1P27545 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cers1P27545 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cers1P27545 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cers1P27545 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cers1P27545 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cers1P27545 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Cers1P27545 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cers1P27545 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cers1P27545 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cers1P27545 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cers1P27545 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cers1P27545 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.14■□□□□ 0.49
Cers1P27545 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Cers1P27545 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cers1P27545 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cers1P27545 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms