Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BdnfP21237 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.66■□□□□ 0.58
BdnfP21237 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BdnfP21237 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BdnfP21237 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.65■□□□□ 0.58
BdnfP21237 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.65■□□□□ 0.58
BdnfP21237 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.65■□□□□ 0.58
BdnfP21237 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BdnfP21237 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BdnfP21237 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.64■□□□□ 0.58
BdnfP21237 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
BdnfP21237 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
BdnfP21237 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BdnfP21237 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.64■□□□□ 0.57
BdnfP21237 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BdnfP21237 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BdnfP21237 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BdnfP21237 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
BdnfP21237 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BdnfP21237 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BdnfP21237 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.63■□□□□ 0.57
BdnfP21237 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.63■□□□□ 0.57
BdnfP21237 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BdnfP21237 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BdnfP21237 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BdnfP21237 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BdnfP21237 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BdnfP21237 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BdnfP21237 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BdnfP21237 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BdnfP21237 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BdnfP21237 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BdnfP21237 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
BdnfP21237 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Mir6236-201ENSMUST00000184437 123 ntBASIC18.61■□□□□ 0.57
BdnfP21237 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.61■□□□□ 0.57
BdnfP21237 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.61■□□□□ 0.57
BdnfP21237 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BdnfP21237 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BdnfP21237 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BdnfP21237 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
BdnfP21237 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.6■□□□□ 0.57
BdnfP21237 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BdnfP21237 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.6■□□□□ 0.57
BdnfP21237 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BdnfP21237 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BdnfP21237 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BdnfP21237 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.59■□□□□ 0.57
BdnfP21237 Gm43530-201ENSMUST00000195920 274 ntBASIC18.59■□□□□ 0.57
BdnfP21237 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.59■□□□□ 0.57
BdnfP21237 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BdnfP21237 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BdnfP21237 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
BdnfP21237 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BdnfP21237 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BdnfP21237 Gm22238-201ENSMUST00000175222 88 ntBASIC18.58■□□□□ 0.56
BdnfP21237 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BdnfP21237 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
BdnfP21237 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BdnfP21237 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BdnfP21237 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BdnfP21237 Gm14117-201ENSMUST00000122417 843 ntBASIC18.57■□□□□ 0.56
BdnfP21237 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.57■□□□□ 0.56
BdnfP21237 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
BdnfP21237 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BdnfP21237 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms