Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TpbpaP13438 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TpbpaP13438 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TpbpaP13438 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TpbpaP13438 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TpbpaP13438 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TpbpaP13438 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TpbpaP13438 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TpbpaP13438 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TpbpaP13438 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TpbpaP13438 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.73■□□□□ 0.43
TpbpaP13438 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.73■□□□□ 0.43
TpbpaP13438 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TpbpaP13438 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.72■□□□□ 0.43
TpbpaP13438 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.72■□□□□ 0.43
TpbpaP13438 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.72■□□□□ 0.43
TpbpaP13438 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.72■□□□□ 0.43
TpbpaP13438 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TpbpaP13438 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TpbpaP13438 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TpbpaP13438 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.72■□□□□ 0.43
TpbpaP13438 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TpbpaP13438 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TpbpaP13438 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.71■□□□□ 0.43
TpbpaP13438 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TpbpaP13438 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TpbpaP13438 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TpbpaP13438 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TpbpaP13438 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.7■□□□□ 0.42
TpbpaP13438 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.7■□□□□ 0.42
TpbpaP13438 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
TpbpaP13438 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TpbpaP13438 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TpbpaP13438 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TpbpaP13438 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.69■□□□□ 0.42
TpbpaP13438 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
TpbpaP13438 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TpbpaP13438 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TpbpaP13438 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TpbpaP13438 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TpbpaP13438 Gm7143-201ENSMUST00000222811 859 ntBASIC17.68■□□□□ 0.42
TpbpaP13438 Gm40881-201ENSMUST00000223397 166 ntBASIC17.68■□□□□ 0.42
TpbpaP13438 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TpbpaP13438 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TpbpaP13438 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms