Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb8P09632 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb8P09632 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb8P09632 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb8P09632 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.9■□□□□ 0.94
Hoxb8P09632 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb8P09632 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb8P09632 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb8P09632 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb8P09632 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb8P09632 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Hoxb8P09632 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb8P09632 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxb8P09632 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.88■□□□□ 0.93
Hoxb8P09632 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 Gm12933-201ENSMUST00000120203 872 ntBASIC20.88■□□□□ 0.93
Hoxb8P09632 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.88■□□□□ 0.93
Hoxb8P09632 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hoxb8P09632 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb8P09632 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.87■□□□□ 0.93
Hoxb8P09632 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.87■□□□□ 0.93
Hoxb8P09632 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxb8P09632 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb8P09632 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
Hoxb8P09632 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.86■□□□□ 0.93
Hoxb8P09632 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb8P09632 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb8P09632 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb8P09632 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb8P09632 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Hoxb8P09632 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hoxb8P09632 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Hoxb8P09632 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.85■□□□□ 0.93
Hoxb8P09632 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Hoxb8P09632 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb8P09632 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
Hoxb8P09632 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxb8P09632 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxb8P09632 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.84■□□□□ 0.93
Hoxb8P09632 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Hoxb8P09632 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.84■□□□□ 0.93
Hoxb8P09632 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.84■□□□□ 0.93
Hoxb8P09632 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.84■□□□□ 0.93
Hoxb8P09632 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxb8P09632 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb8P09632 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Hoxb8P09632 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxb8P09632 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxb8P09632 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxb8P09632 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.83■□□□□ 0.93
Hoxb8P09632 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.83■□□□□ 0.93
Hoxb8P09632 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxb8P09632 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb8P09632 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb8P09632 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.82■□□□□ 0.92
Hoxb8P09632 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb8P09632 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb8P09632 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms