Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Ercc1P07903 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc1P07903 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc1P07903 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc1P07903 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc1P07903 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc1P07903 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ercc1P07903 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc1P07903 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc1P07903 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc1P07903 Gm45444-201ENSMUST00000211394 898 ntBASIC16.33■□□□□ 0.2
Ercc1P07903 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ercc1P07903 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc1P07903 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc1P07903 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc1P07903 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Ercc1P07903 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc1P07903 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ercc1P07903 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.32■□□□□ 0.2
Ercc1P07903 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ercc1P07903 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ercc1P07903 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ercc1P07903 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc1P07903 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.31■□□□□ 0.2
Ercc1P07903 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ercc1P07903 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ercc1P07903 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc1P07903 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.3■□□□□ 0.2
Ercc1P07903 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.3■□□□□ 0.2
Ercc1P07903 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ercc1P07903 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ercc1P07903 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
Ercc1P07903 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ercc1P07903 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.28■□□□□ 0.2
Ercc1P07903 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ercc1P07903 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.28■□□□□ 0.2
Ercc1P07903 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.28■□□□□ 0.2
Ercc1P07903 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ercc1P07903 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ercc1P07903 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc1P07903 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.27■□□□□ 0.2
Ercc1P07903 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ercc1P07903 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.27■□□□□ 0.19
Ercc1P07903 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Ercc1P07903 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc1P07903 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc1P07903 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms