Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P06328 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.28□□□□□ -0.12
P06328 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.28□□□□□ -0.12
P06328 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06328 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P06328 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P06328 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P06328 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P06328 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.27□□□□□ -0.12
P06328 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.27□□□□□ -0.13
P06328 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
P06328 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.27□□□□□ -0.13
P06328 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P06328 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P06328 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P06328 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.26□□□□□ -0.13
P06328 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.26□□□□□ -0.13
P06328 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06328 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
P06328 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.25□□□□□ -0.13
P06328 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.25□□□□□ -0.13
P06328 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.25□□□□□ -0.13
P06328 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.25□□□□□ -0.13
P06328 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06328 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.24□□□□□ -0.13
P06328 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.24□□□□□ -0.13
P06328 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
P06328 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.24□□□□□ -0.13
P06328 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.24□□□□□ -0.13
P06328 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06328 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
P06328 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P06328 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P06328 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P06328 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
P06328 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.23□□□□□ -0.13
P06328 Gm22238-201ENSMUST00000175222 88 ntBASIC14.23□□□□□ -0.13
P06328 Gm9959-201ENSMUST00000068277 390 ntBASIC14.23□□□□□ -0.13
P06328 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06328 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms