Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IghmP01872 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IghmP01872 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IghmP01872 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IghmP01872 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IghmP01872 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IghmP01872 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
IghmP01872 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.33■□□□□ 0.52
IghmP01872 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
IghmP01872 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IghmP01872 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IghmP01872 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
IghmP01872 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IghmP01872 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.32■□□□□ 0.52
IghmP01872 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Gm12922-201ENSMUST00000120626 809 ntBASIC18.32■□□□□ 0.52
IghmP01872 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.32■□□□□ 0.52
IghmP01872 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.32■□□□□ 0.52
IghmP01872 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.32■□□□□ 0.52
IghmP01872 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IghmP01872 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IghmP01872 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.31■□□□□ 0.52
IghmP01872 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IghmP01872 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IghmP01872 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IghmP01872 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
IghmP01872 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
IghmP01872 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
IghmP01872 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
IghmP01872 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
IghmP01872 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IghmP01872 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IghmP01872 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
IghmP01872 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
IghmP01872 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.29■□□□□ 0.52
IghmP01872 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
IghmP01872 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
IghmP01872 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
IghmP01872 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IghmP01872 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
IghmP01872 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
IghmP01872 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
IghmP01872 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.28■□□□□ 0.52
IghmP01872 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.28■□□□□ 0.52
IghmP01872 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IghmP01872 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.27■□□□□ 0.52
IghmP01872 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.27■□□□□ 0.52
IghmP01872 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IghmP01872 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
IghmP01872 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
IghmP01872 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IghmP01872 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IghmP01872 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IghmP01872 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IghmP01872 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IghmP01872 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
IghmP01872 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms