Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Slc6a20bO88575 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc6a20bO88575 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.51■■□□□ 1.03
Slc6a20bO88575 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Slc6a20bO88575 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Slc6a20bO88575 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.51■■□□□ 1.03
Slc6a20bO88575 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a20bO88575 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a20bO88575 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Slc6a20bO88575 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a20bO88575 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.48■■□□□ 1.03
Slc6a20bO88575 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Slc6a20bO88575 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Slc6a20bO88575 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a20bO88575 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a20bO88575 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a20bO88575 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a20bO88575 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc6a20bO88575 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.46■■□□□ 1.03
Slc6a20bO88575 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a20bO88575 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Slc6a20bO88575 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.45■■□□□ 1.02
Slc6a20bO88575 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Slc6a20bO88575 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc6a20bO88575 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Slc6a20bO88575 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Slc6a20bO88575 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a20bO88575 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.42■■□□□ 1.02
Slc6a20bO88575 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a20bO88575 Gm26524-201ENSMUST00000192339 390 ntBASIC21.42■■□□□ 1.02
Slc6a20bO88575 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a20bO88575 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a20bO88575 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a20bO88575 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.41■■□□□ 1.02
Slc6a20bO88575 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc6a20bO88575 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a20bO88575 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Slc6a20bO88575 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.4■■□□□ 1.02
Slc6a20bO88575 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a20bO88575 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Slc6a20bO88575 Gm13836-201ENSMUST00000121159 501 ntBASIC21.4■■□□□ 1.02
Slc6a20bO88575 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a20bO88575 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a20bO88575 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc6a20bO88575 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.39■■□□□ 1.02
Slc6a20bO88575 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc6a20bO88575 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a20bO88575 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a20bO88575 Rab3c-203ENSMUST00000224180 967 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms