Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3bO88509 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Gm18284-201ENSMUST00000172604 624 ntBASIC18.82■□□□□ 0.6
Dnmt3bO88509 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3bO88509 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3bO88509 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.81■□□□□ 0.6
Dnmt3bO88509 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3bO88509 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3bO88509 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3bO88509 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Dnmt3bO88509 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3bO88509 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3bO88509 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.79■□□□□ 0.6
Dnmt3bO88509 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3bO88509 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Rarb-207ENSMUST00000225921 2756 ntBASIC18.77■□□□□ 0.6
Dnmt3bO88509 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Dnmt3bO88509 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Dnmt3bO88509 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.76■□□□□ 0.59
Dnmt3bO88509 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3bO88509 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.75■□□□□ 0.59
Dnmt3bO88509 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Dnmt3bO88509 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnmt3bO88509 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms