Protein–RNA interactions for Protein: O70373

Xirp1, Xin actin-binding repeat-containing protein 1, mousemouse

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp1O70373 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xirp1O70373 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xirp1O70373 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xirp1O70373 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Xirp1O70373 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Xirp1O70373 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Xirp1O70373 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xirp1O70373 AA386476-201ENSMUST00000098781 1665 ntBASIC20.73■□□□□ 0.91
Xirp1O70373 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xirp1O70373 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Xirp1O70373 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.73■□□□□ 0.91
Xirp1O70373 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xirp1O70373 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Xirp1O70373 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Xirp1O70373 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.72■□□□□ 0.91
Xirp1O70373 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Xirp1O70373 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Xirp1O70373 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Xirp1O70373 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Xirp1O70373 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.71■□□□□ 0.91
Xirp1O70373 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xirp1O70373 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.7■□□□□ 0.9
Xirp1O70373 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Xirp1O70373 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xirp1O70373 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xirp1O70373 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xirp1O70373 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Xirp1O70373 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xirp1O70373 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.69■□□□□ 0.9
Xirp1O70373 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.69■□□□□ 0.9
Xirp1O70373 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xirp1O70373 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Xirp1O70373 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xirp1O70373 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xirp1O70373 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Xirp1O70373 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.68■□□□□ 0.9
Xirp1O70373 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.68■□□□□ 0.9
Xirp1O70373 Golgb1-201ENSMUST00000023534 498 ntBASIC20.68■□□□□ 0.9
Xirp1O70373 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xirp1O70373 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xirp1O70373 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xirp1O70373 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Xirp1O70373 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.67■□□□□ 0.9
Xirp1O70373 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xirp1O70373 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Xirp1O70373 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Xirp1O70373 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Xirp1O70373 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xirp1O70373 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Xirp1O70373 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xirp1O70373 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Xirp1O70373 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xirp1O70373 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Xirp1O70373 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Xirp1O70373 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Xirp1O70373 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Xirp1O70373 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Xirp1O70373 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xirp1O70373 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
Xirp1O70373 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Xirp1O70373 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Xirp1O70373 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xirp1O70373 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xirp1O70373 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms