Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ldb2O55203 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.49■□□□□ 0.71
Ldb2O55203 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb2O55203 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Ldb2O55203 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ldb2O55203 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
Ldb2O55203 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb2O55203 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ldb2O55203 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Serp2-204ENSMUST00000228055 705 ntBASIC19.47■□□□□ 0.71
Ldb2O55203 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ldb2O55203 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.46■□□□□ 0.71
Ldb2O55203 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ldb2O55203 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Ldb2O55203 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.45■□□□□ 0.7
Ldb2O55203 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ldb2O55203 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.45■□□□□ 0.7
Ldb2O55203 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Gm45417-201ENSMUST00000209533 758 ntBASIC19.45■□□□□ 0.7
Ldb2O55203 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Ldb2O55203 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ldb2O55203 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ldb2O55203 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ldb2O55203 Gm43173-201ENSMUST00000202246 593 ntBASIC19.44■□□□□ 0.7
Ldb2O55203 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ldb2O55203 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ldb2O55203 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
Ldb2O55203 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb2O55203 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb2O55203 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.43■□□□□ 0.7
Ldb2O55203 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.43■□□□□ 0.7
Ldb2O55203 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb2O55203 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.43■□□□□ 0.7
Ldb2O55203 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
Ldb2O55203 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb2O55203 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ldb2O55203 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ldb2O55203 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.42■□□□□ 0.7
Ldb2O55203 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ldb2O55203 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb2O55203 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ldb2O55203 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb2O55203 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Ldb2O55203 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb2O55203 Gm6139-201ENSMUST00000079261 882 ntBASIC19.42■□□□□ 0.7
Ldb2O55203 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ldb2O55203 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.42■□□□□ 0.7
Ldb2O55203 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Ldb2O55203 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms