Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.67■□□□□ 0.58
Abca4O35600 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.67■□□□□ 0.58
Abca4O35600 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Abca4O35600 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Gm38205-201ENSMUST00000192243 258 ntBASIC18.66■□□□□ 0.58
Abca4O35600 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Abca4O35600 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca4O35600 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
Abca4O35600 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.65■□□□□ 0.58
Abca4O35600 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Abca4O35600 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.65■□□□□ 0.58
Abca4O35600 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Abca4O35600 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Abca4O35600 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Abca4O35600 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Abca4O35600 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abca4O35600 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abca4O35600 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abca4O35600 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abca4O35600 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abca4O35600 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Abca4O35600 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.63■□□□□ 0.57
Abca4O35600 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.63■□□□□ 0.57
Abca4O35600 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.63■□□□□ 0.57
Abca4O35600 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.63■□□□□ 0.57
Abca4O35600 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.63■□□□□ 0.57
Abca4O35600 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca4O35600 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.62■□□□□ 0.57
Abca4O35600 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.62■□□□□ 0.57
Abca4O35600 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Abca4O35600 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca4O35600 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Abca4O35600 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Abca4O35600 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Abca4O35600 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca4O35600 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Abca4O35600 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Abca4O35600 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Abca4O35600 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca4O35600 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Abca4O35600 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
Abca4O35600 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.59■□□□□ 0.57
Abca4O35600 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Abca4O35600 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.59■□□□□ 0.57
Abca4O35600 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca4O35600 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abca4O35600 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abca4O35600 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abca4O35600 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abca4O35600 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Abca4O35600 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abca4O35600 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.58■□□□□ 0.56
Abca4O35600 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.58■□□□□ 0.56
Abca4O35600 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abca4O35600 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms