Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Col15a1O35206 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Col15a1O35206 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Col15a1O35206 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col15a1O35206 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col15a1O35206 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC25.4■■□□□ 1.66
Col15a1O35206 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC25.4■■□□□ 1.66
Col15a1O35206 Gm22240-201ENSMUST00000175225 82 ntBASIC25.4■■□□□ 1.66
Col15a1O35206 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Col15a1O35206 AA386476-201ENSMUST00000098781 1665 ntBASIC25.4■■□□□ 1.66
Col15a1O35206 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Col15a1O35206 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.39■■□□□ 1.66
Col15a1O35206 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Col15a1O35206 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Col15a1O35206 Gm20049-201ENSMUST00000219950 730 ntBASIC25.39■■□□□ 1.65
Col15a1O35206 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col15a1O35206 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col15a1O35206 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col15a1O35206 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
Col15a1O35206 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC25.38■■□□□ 1.65
Col15a1O35206 Gm6211-202ENSMUST00000167849 925 ntBASIC25.38■■□□□ 1.65
Col15a1O35206 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Col15a1O35206 Gm5408-201ENSMUST00000197998 747 ntBASIC25.38■■□□□ 1.65
Col15a1O35206 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC25.38■■□□□ 1.65
Col15a1O35206 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col15a1O35206 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.38■■□□□ 1.65
Col15a1O35206 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
Col15a1O35206 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Col15a1O35206 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Col15a1O35206 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Col15a1O35206 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col15a1O35206 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col15a1O35206 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC25.36■■□□□ 1.65
Col15a1O35206 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col15a1O35206 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col15a1O35206 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
Col15a1O35206 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Col15a1O35206 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Col15a1O35206 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col15a1O35206 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC25.35■■□□□ 1.65
Col15a1O35206 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Col15a1O35206 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC25.35■■□□□ 1.65
Col15a1O35206 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col15a1O35206 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Col15a1O35206 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.34■■□□□ 1.65
Col15a1O35206 Gm10252-201ENSMUST00000209541 832 ntBASIC25.34■■□□□ 1.65
Col15a1O35206 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.34■■□□□ 1.65
Col15a1O35206 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Col15a1O35206 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Col15a1O35206 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Col15a1O35206 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col15a1O35206 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC25.33■■□□□ 1.65
Col15a1O35206 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Col15a1O35206 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Col15a1O35206 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC25.32■■□□□ 1.64
Col15a1O35206 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col15a1O35206 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col15a1O35206 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col15a1O35206 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.32■■□□□ 1.64
Col15a1O35206 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.32■■□□□ 1.64
Col15a1O35206 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col15a1O35206 Gm12504-201ENSMUST00000120860 2231 ntBASIC25.32■■□□□ 1.64
Col15a1O35206 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.32■■□□□ 1.64
Col15a1O35206 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 Gm8520-201ENSMUST00000186517 868 ntBASIC25.31■■□□□ 1.64
Col15a1O35206 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col15a1O35206 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.3■■□□□ 1.64
Col15a1O35206 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.3■■□□□ 1.64
Col15a1O35206 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms