Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2b3O09039 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2b3O09039 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sh2b3O09039 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2b3O09039 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh2b3O09039 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sh2b3O09039 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2b3O09039 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2b3O09039 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sh2b3O09039 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.36■□□□□ 0.37
Sh2b3O09039 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sh2b3O09039 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2b3O09039 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh2b3O09039 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh2b3O09039 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.35■□□□□ 0.37
Sh2b3O09039 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh2b3O09039 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sh2b3O09039 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2b3O09039 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2b3O09039 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Gm10493-201ENSMUST00000097270 612 ntBASIC17.34■□□□□ 0.37
Sh2b3O09039 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2b3O09039 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2b3O09039 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.33■□□□□ 0.36
Sh2b3O09039 Gm40848-201ENSMUST00000221998 324 ntBASIC17.33■□□□□ 0.36
Sh2b3O09039 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh2b3O09039 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Sh2b3O09039 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Sh2b3O09039 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sh2b3O09039 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2b3O09039 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Sh2b3O09039 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2b3O09039 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh2b3O09039 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.31■□□□□ 0.36
Sh2b3O09039 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2b3O09039 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.3■□□□□ 0.36
Sh2b3O09039 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2b3O09039 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2b3O09039 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh2b3O09039 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Sh2b3O09039 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2b3O09039 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh2b3O09039 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.29■□□□□ 0.36
Sh2b3O09039 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2b3O09039 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms