Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcf11G3X9Z4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcf11G3X9Z4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcf11G3X9Z4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Pcf11G3X9Z4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Pcf11G3X9Z4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC30.13■■■□□ 2.41
Pcf11G3X9Z4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC30.13■■■□□ 2.41
Pcf11G3X9Z4 Gm13534-201ENSMUST00000121169 513 ntBASIC30.12■■■□□ 2.41
Pcf11G3X9Z4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Pcf11G3X9Z4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pcf11G3X9Z4 Gm10602-201ENSMUST00000098239 609 ntBASIC30.12■■■□□ 2.41
Pcf11G3X9Z4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC30.12■■■□□ 2.41
Pcf11G3X9Z4 Mir5133-201ENSMUST00000174955 77 ntBASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Pcf11G3X9Z4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 Gm10655-201ENSMUST00000098658 1397 ntBASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pcf11G3X9Z4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Pcf11G3X9Z4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcf11G3X9Z4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcf11G3X9Z4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Nespas-201ENSMUST00000143738 1083 ntBASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
Pcf11G3X9Z4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 Gm10653-202ENSMUST00000139570 835 ntBASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Pcf11G3X9Z4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Gm26524-201ENSMUST00000192339 390 ntBASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Pcf11G3X9Z4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pcf11G3X9Z4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Gm6420-201ENSMUST00000193885 723 ntBASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Gm7860-201ENSMUST00000121190 879 ntBASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Gm4968-201ENSMUST00000071458 858 ntBASIC30.03■■■□□ 2.4
Pcf11G3X9Z4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
Pcf11G3X9Z4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC30.02■■■□□ 2.4
Pcf11G3X9Z4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pcf11G3X9Z4 Gm6211-202ENSMUST00000167849 925 ntBASIC30.01■■■□□ 2.39
Pcf11G3X9Z4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pcf11G3X9Z4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcf11G3X9Z4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
Pcf11G3X9Z4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC30■■■□□ 2.39
Pcf11G3X9Z4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcf11G3X9Z4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Gm12441-201ENSMUST00000121806 588 ntBASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcf11G3X9Z4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Pcf11G3X9Z4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Pcf11G3X9Z4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Pcf11G3X9Z4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms