Protein–RNA interactions for Protein: F2Z461

Herc6, E3 ISG15--protein ligase Herc6, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6F2Z461 Golph3-205ENSMUST00000228671 2842 ntBASIC18.82■□□□□ 0.6
Herc6F2Z461 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.82■□□□□ 0.6
Herc6F2Z461 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Herc6F2Z461 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Herc6F2Z461 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Herc6F2Z461 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc6F2Z461 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.81■□□□□ 0.6
Herc6F2Z461 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.81■□□□□ 0.6
Herc6F2Z461 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc6F2Z461 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.81■□□□□ 0.6
Herc6F2Z461 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.8■□□□□ 0.6
Herc6F2Z461 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Herc6F2Z461 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.8■□□□□ 0.6
Herc6F2Z461 Rps24-207ENSMUST00000224568 714 ntBASIC18.8■□□□□ 0.6
Herc6F2Z461 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Herc6F2Z461 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herc6F2Z461 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herc6F2Z461 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herc6F2Z461 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Gm45102-201ENSMUST00000207427 857 ntBASIC18.79■□□□□ 0.6
Herc6F2Z461 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Herc6F2Z461 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herc6F2Z461 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Herc6F2Z461 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Herc6F2Z461 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc6F2Z461 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herc6F2Z461 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.77■□□□□ 0.6
Herc6F2Z461 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Herc6F2Z461 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Herc6F2Z461 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Herc6F2Z461 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.76■□□□□ 0.59
Herc6F2Z461 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Herc6F2Z461 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herc6F2Z461 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.75■□□□□ 0.59
Herc6F2Z461 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc6F2Z461 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Herc6F2Z461 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Herc6F2Z461 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.75■□□□□ 0.59
Herc6F2Z461 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Herc6F2Z461 Gm14117-201ENSMUST00000122417 843 ntBASIC18.75■□□□□ 0.59
Herc6F2Z461 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.75■□□□□ 0.59
Herc6F2Z461 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc6F2Z461 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc6F2Z461 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc6F2Z461 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc6F2Z461 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms