Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ift140E9PY46 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
Ift140E9PY46 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC31.57■■■□□ 2.64
Ift140E9PY46 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ift140E9PY46 AL672049.1-201ENSMUST00000197943 91 ntBASIC31.56■■■□□ 2.64
Ift140E9PY46 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ift140E9PY46 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ift140E9PY46 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Ift140E9PY46 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ift140E9PY46 AC122428.2-201ENSMUST00000216321 1832 ntBASIC31.55■■■□□ 2.64
Ift140E9PY46 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ift140E9PY46 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ift140E9PY46 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC31.54■■■□□ 2.64
Ift140E9PY46 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 AC131586.2-201ENSMUST00000228370 1512 ntBASIC31.54■■■□□ 2.64
Ift140E9PY46 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC31.54■■■□□ 2.64
Ift140E9PY46 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ift140E9PY46 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Ift140E9PY46 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Ift140E9PY46 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ift140E9PY46 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ift140E9PY46 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ift140E9PY46 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ift140E9PY46 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ift140E9PY46 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ift140E9PY46 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ift140E9PY46 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC31.52■■■□□ 2.64
Ift140E9PY46 Gm9484-201ENSMUST00000195892 1159 ntBASIC31.52■■■□□ 2.64
Ift140E9PY46 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ift140E9PY46 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.51■■■□□ 2.64
Ift140E9PY46 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.51■■■□□ 2.64
Ift140E9PY46 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Ift140E9PY46 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
Ift140E9PY46 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Gm37055-201ENSMUST00000191866 133 ntBASIC31.51■■■□□ 2.63
Ift140E9PY46 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ift140E9PY46 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ift140E9PY46 Dio3-201ENSMUST00000097228 1449 ntBASIC31.5■■■□□ 2.63
Ift140E9PY46 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC31.5■■■□□ 2.63
Ift140E9PY46 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ift140E9PY46 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC31.5■■■□□ 2.63
Ift140E9PY46 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ift140E9PY46 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Ift140E9PY46 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ift140E9PY46 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Ift140E9PY46 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Ift140E9PY46 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ift140E9PY46 AC153881.1-201ENSMUST00000214448 284 ntBASIC31.48■■■□□ 2.63
Ift140E9PY46 Gm10698-201ENSMUST00000182663 604 ntBASIC31.47■■■□□ 2.63
Ift140E9PY46 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC31.47■■■□□ 2.63
Ift140E9PY46 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Ift140E9PY46 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC31.47■■■□□ 2.63
Ift140E9PY46 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
Ift140E9PY46 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ift140E9PY46 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ift140E9PY46 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ift140E9PY46 Gm13509-201ENSMUST00000119733 1308 ntBASIC31.46■■■□□ 2.63
Ift140E9PY46 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ift140E9PY46 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC31.46■■■□□ 2.63
Ift140E9PY46 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC31.46■■■□□ 2.63
Ift140E9PY46 AC154649.1-201ENSMUST00000227392 384 ntBASIC31.46■■■□□ 2.63
Ift140E9PY46 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ift140E9PY46 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ift140E9PY46 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ift140E9PY46 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Ift140E9PY46 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ift140E9PY46 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ift140E9PY46 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC31.45■■■□□ 2.62
Ift140E9PY46 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC31.45■■■□□ 2.62
Ift140E9PY46 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC31.45■■■□□ 2.62
Ift140E9PY46 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
Ift140E9PY46 Gm2559-201ENSMUST00000201323 363 ntBASIC31.45■■■□□ 2.62
Ift140E9PY46 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC31.45■■■□□ 2.62
Ift140E9PY46 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ift140E9PY46 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC31.44■■■□□ 2.62
Ift140E9PY46 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ift140E9PY46 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ift140E9PY46 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC31.44■■■□□ 2.62
Ift140E9PY46 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ift140E9PY46 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Ift140E9PY46 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ift140E9PY46 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ift140E9PY46 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ift140E9PY46 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ift140E9PY46 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ift140E9PY46 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms