Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Gm15820-201ENSMUST00000201566 728 ntBASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 AA386476-201ENSMUST00000098781 1665 ntBASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-1A0N8R1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-1A0N8R1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-1A0N8R1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-1A0N8R1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav12-1A0N8R1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.27■□□□□ 0.19
Trav12-1A0N8R1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-1A0N8R1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Golph3-205ENSMUST00000228671 2842 ntBASIC16.25■□□□□ 0.19
Trav12-1A0N8R1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms