Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv17A0A140T8P8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv17A0A140T8P8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.93□□□□□ -0.02
Trbv17A0A140T8P8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv17A0A140T8P8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv17A0A140T8P8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv17A0A140T8P8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv17A0A140T8P8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Gm21956-201ENSMUST00000179946 522 ntBASIC14.88□□□□□ -0.03
Trbv17A0A140T8P8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms