Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv13-2A0A140T8N6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv13-2A0A140T8N6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv13-2A0A140T8N6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv13-2A0A140T8N6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv13-2A0A140T8N6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm12821-201ENSMUST00000120022 600 ntBASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv13-2A0A140T8N6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv13-2A0A140T8N6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv13-2A0A140T8N6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms