Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lcmt1A0A0U1RNF2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lcmt1A0A0U1RNF2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Lcmt1A0A0U1RNF2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lcmt1A0A0U1RNF2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lcmt1A0A0U1RNF2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.64■■□□□ 1.06
Lcmt1A0A0U1RNF2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lcmt1A0A0U1RNF2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lcmt1A0A0U1RNF2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lcmt1A0A0U1RNF2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lcmt1A0A0U1RNF2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lcmt1A0A0U1RNF2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lcmt1A0A0U1RNF2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.59■■□□□ 1.05
Lcmt1A0A0U1RNF2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lcmt1A0A0U1RNF2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lcmt1A0A0U1RNF2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.58■■□□□ 1.05
Lcmt1A0A0U1RNF2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lcmt1A0A0U1RNF2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lcmt1A0A0U1RNF2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lcmt1A0A0U1RNF2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lcmt1A0A0U1RNF2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lcmt1A0A0U1RNF2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Lcmt1A0A0U1RNF2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms