Protein–RNA interactions for Protein: A0A0G2JEI6

Igkv6-29, Immunoglobulin kappa chain variable 6-29 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-29A0A0G2JEI6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Gm10602-201ENSMUST00000098239 609 ntBASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Gm38205-201ENSMUST00000192243 258 ntBASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv6-29A0A0G2JEI6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.37■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.36■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.35■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Gm13534-201ENSMUST00000121169 513 ntBASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.33■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv6-29A0A0G2JEI6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv6-29A0A0G2JEI6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.33■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-29A0A0G2JEI6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms