Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Igkv8-28A0A0G2JE47 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv8-28A0A0G2JE47 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv8-28A0A0G2JE47 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv8-28A0A0G2JE47 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Rarb-207ENSMUST00000225921 2756 ntBASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv8-28A0A0G2JE47 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv8-28A0A0G2JE47 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv8-28A0A0G2JE47 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv8-28A0A0G2JE47 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms