Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav11A0A0B4J1J9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Mir6538-201ENSMUST00000183713 110 ntBASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav11A0A0B4J1J9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav11A0A0B4J1J9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav11A0A0B4J1J9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Gm45444-201ENSMUST00000211394 898 ntBASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav11A0A0B4J1J9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav11A0A0B4J1J9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms