Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-42A0A0A6YY38 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Ighv1-42A0A0A6YY38 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-42A0A0A6YY38 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-42A0A0A6YY38 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-42A0A0A6YY38 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gm7514-201ENSMUST00000209475 934 ntBASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-42A0A0A6YY38 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gm12933-201ENSMUST00000120203 872 ntBASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-42A0A0A6YY38 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-42A0A0A6YY38 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Gm10602-201ENSMUST00000098239 609 ntBASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-42A0A0A6YY38 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-42A0A0A6YY38 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Ighv1-42A0A0A6YY38 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-42A0A0A6YY38 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-42A0A0A6YY38 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-42A0A0A6YY38 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-42A0A0A6YY38 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms