Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Notumos-201ENSMUST00000151998 2659 ntBASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm13234-201ENSMUST00000120010 747 ntBASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.08■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-43A0A0A6YXN5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-43A0A0A6YXN5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm37179-201ENSMUST00000194862 823 ntBASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.05■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.03■□□□□ 0.48
Ighv1-43A0A0A6YXN5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms