Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-6A0A075B603 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-6A0A075B603 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Gm10232-201ENSMUST00000089221 720 ntBASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-6A0A075B603 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Gm13238-201ENSMUST00000117655 780 ntBASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-6A0A075B603 Grk6-206ENSMUST00000224995 2971 ntBASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-6A0A075B603 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-6A0A075B603 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-6A0A075B603 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms