Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd9P40240 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.82□□□□□ -0.84
Cd9P40240 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cd9P40240 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.82□□□□□ -0.84
Cd9P40240 Cbwd1-201ENSMUST00000025815 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd9P40240 Zfp42-203ENSMUST00000211248 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd9P40240 Scgn-201ENSMUST00000021770 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd9P40240 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd9P40240 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cd9P40240 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
Cd9P40240 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 BC030343-201ENSMUST00000199606 2439 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Cd9P40240 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cd9P40240 Gm11979-201ENSMUST00000119629 743 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Gm5257-201ENSMUST00000121823 790 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Gm15247-201ENSMUST00000124513 403 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.81□□□□□ -0.84
Cd9P40240 4930444E06Rik-201ENSMUST00000146746 1240 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm8907-201ENSMUST00000182240 1003 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Scgb1b11-201ENSMUST00000186031 418 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Zcwpw2-203ENSMUST00000187803 372 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Gm8384-201ENSMUST00000190905 704 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Scgb1b18-201ENSMUST00000191255 402 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Gm37782-201ENSMUST00000194879 678 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Igkv3-11-201ENSMUST00000197500 385 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm5738-201ENSMUST00000206016 779 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cd9P40240 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.81□□□□□ -0.84
Cd9P40240 CT025603.2-201ENSMUST00000224369 484 ntBASIC9.81□□□□□ -0.84
Cd9P40240 AC174647.1-201ENSMUST00000227419 1271 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cd9P40240 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.81□□□□□ -0.84
Cd9P40240 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm15550-201ENSMUST00000120824 1748 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Aldh8a1-201ENSMUST00000042699 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Gm9978-201ENSMUST00000069431 3273 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Gsdmc2-201ENSMUST00000089900 1981 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cd9P40240 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.81□□□□□ -0.84
Cd9P40240 Fam169a-201ENSMUST00000042517 4547 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd9P40240 Aldoc-201ENSMUST00000017534 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Cd9P40240 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.8□□□□□ -0.84
Cd9P40240 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.8□□□□□ -0.84
Cd9P40240 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Kdelc1-202ENSMUST00000065767 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Cd9P40240 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gm26288-201ENSMUST00000104168 132 ntBASIC9.8□□□□□ -0.84
Cd9P40240 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gm14274-201ENSMUST00000117182 615 ntBASIC9.8□□□□□ -0.84
Cd9P40240 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC9.8□□□□□ -0.84
Cd9P40240 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.8□□□□□ -0.84
Cd9P40240 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cd9P40240 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.8□□□□□ -0.84
Cd9P40240 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC9.8□□□□□ -0.84
Cd9P40240 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC9.8□□□□□ -0.84
Cd9P40240 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Cd9P40240 Gm18204-201ENSMUST00000209835 793 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms