Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc188F6WEU2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Agmo-204ENSMUST00000160390 2194 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Wfdc6a-202ENSMUST00000109342 796 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm12538-201ENSMUST00000120064 486 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm15280-201ENSMUST00000126961 640 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Myhas-201ENSMUST00000137662 787 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm16238-201ENSMUST00000159343 586 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm8957-201ENSMUST00000182082 1012 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm44744-201ENSMUST00000208234 852 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Il18-204ENSMUST00000214117 860 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm18029-201ENSMUST00000219973 844 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm33263-201ENSMUST00000220371 459 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 AC154640.1-204ENSMUST00000227105 648 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Cinp-202ENSMUST00000220607 1579 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Olfr1491-204ENSMUST00000216366 1726 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Gm45728-201ENSMUST00000211475 2979 ntBASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc188F6WEU2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Fmo4-201ENSMUST00000028014 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm44746-201ENSMUST00000205565 1349 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 2610042L04Rik-202ENSMUST00000165466 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm12124-201ENSMUST00000120504 679 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm15879-201ENSMUST00000139334 809 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm8425-201ENSMUST00000171395 769 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm23403-201ENSMUST00000179169 110 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Slc35a4-205ENSMUST00000185899 312 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm37144-201ENSMUST00000195445 1150 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 AC132384.10-201ENSMUST00000217862 1204 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Gm6989-201ENSMUST00000218409 654 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 AC137117.2-201ENSMUST00000228560 282 ntBASIC10.11□□□□□ -0.79
Ccdc188F6WEU2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms