Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.27□□□□□ -0.76
Trub1Q8C0D0 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC10.27□□□□□ -0.76
Trub1Q8C0D0 Sntg1-202ENSMUST00000115488 1554 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Trub1Q8C0D0 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trub1Q8C0D0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trub1Q8C0D0 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm43585-201ENSMUST00000199375 1403 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 AC151903.1-201ENSMUST00000226677 1423 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm13171-201ENSMUST00000117233 391 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm11340-201ENSMUST00000119226 412 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm15798-201ENSMUST00000120082 408 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm15373-201ENSMUST00000121495 214 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm14370-201ENSMUST00000122460 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm24140-201ENSMUST00000122773 326 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm15273-201ENSMUST00000142302 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm7023-201ENSMUST00000147295 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm14357-201ENSMUST00000178352 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm14361-201ENSMUST00000178547 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm14348-201ENSMUST00000179183 868 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm27605-201ENSMUST00000184648 136 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm37994-201ENSMUST00000192124 409 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 1700008N11Rik-201ENSMUST00000209848 636 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm3635-201ENSMUST00000212314 354 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm18745-201ENSMUST00000216018 548 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 AI463170-201ENSMUST00000217839 970 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm6684-201ENSMUST00000053717 685 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm15666-202ENSMUST00000219490 2796 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm10790-202ENSMUST00000221285 1696 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Arhgap25-203ENSMUST00000113637 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm44168-201ENSMUST00000204835 3539 ntBASIC10.27□□□□□ -0.77
Trub1Q8C0D0 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Olfr152-202ENSMUST00000105210 2084 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Ccl3-201ENSMUST00000001008 766 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm23769-201ENSMUST00000104441 121 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm4877-201ENSMUST00000104977 798 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm12418-201ENSMUST00000118116 942 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm11979-201ENSMUST00000119629 743 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm15280-201ENSMUST00000126961 640 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm29763-201ENSMUST00000205306 616 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Gm18204-201ENSMUST00000209835 793 ntBASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.26□□□□□ -0.77
Trub1Q8C0D0 AC161877.1-201ENSMUST00000227736 699 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms