Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm6500-201ENSMUST00000119412 451 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Ermard-209ENSMUST00000226561 1019 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Zfp865-202ENSMUST00000076791 1129 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gm5910-201ENSMUST00000211819 1746 ntBASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ptcd1Q8C2E4 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm15602-201ENSMUST00000116162 465 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm7180-201ENSMUST00000121753 513 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm6317-201ENSMUST00000183159 1000 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm37020-201ENSMUST00000195303 992 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 AC134607.1-201ENSMUST00000214707 485 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ptcd1Q8C2E4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ptcd1Q8C2E4 Gm6141-201ENSMUST00000117181 695 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms