Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nubp1Q9R060 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.08■□□□□ 0.32
Nubp1Q9R060 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nubp1Q9R060 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Gm27801-201ENSMUST00000184174 223 ntBASIC17.07■□□□□ 0.32
Nubp1Q9R060 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nubp1Q9R060 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Nubp1Q9R060 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.07■□□□□ 0.32
Nubp1Q9R060 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nubp1Q9R060 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nubp1Q9R060 Reep4-203ENSMUST00000226563 1444 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nubp1Q9R060 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm7290-201ENSMUST00000104990 617 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm12918-201ENSMUST00000120234 636 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm15710-201ENSMUST00000121821 636 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm5075-201ENSMUST00000196916 622 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.04■□□□□ 0.32
Nubp1Q9R060 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nubp1Q9R060 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Gm19891-201ENSMUST00000189771 303 ntBASIC17.03■□□□□ 0.32
Nubp1Q9R060 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nubp1Q9R060 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nubp1Q9R060 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nubp1Q9R060 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nubp1Q9R060 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nubp1Q9R060 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.01■□□□□ 0.31
Nubp1Q9R060 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms