Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a2Q9JLR1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a2Q9JLR1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Sec61a2Q9JLR1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sec61a2Q9JLR1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a2Q9JLR1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec61a2Q9JLR1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sec61a2Q9JLR1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms