Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup50Q9JIH2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.77■□□□□ 0.91
Nup50Q9JIH2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nup50Q9JIH2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.76■□□□□ 0.91
Nup50Q9JIH2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Rps24-207ENSMUST00000224568 714 ntBASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup50Q9JIH2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup50Q9JIH2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nup50Q9JIH2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup50Q9JIH2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup50Q9JIH2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Nup50Q9JIH2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Nup50Q9JIH2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup50Q9JIH2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nup50Q9JIH2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.69■□□□□ 0.9
Nup50Q9JIH2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup50Q9JIH2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup50Q9JIH2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup50Q9JIH2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.67■□□□□ 0.9
Nup50Q9JIH2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup50Q9JIH2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Nup50Q9JIH2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup50Q9JIH2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nup50Q9JIH2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nup50Q9JIH2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup50Q9JIH2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup50Q9JIH2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.66■□□□□ 0.9
Nup50Q9JIH2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup50Q9JIH2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms