Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim39Q9ESN2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim39Q9ESN2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim39Q9ESN2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim39Q9ESN2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Trim39Q9ESN2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.14■□□□□ 0.5
Trim39Q9ESN2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim39Q9ESN2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim39Q9ESN2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim39Q9ESN2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim39Q9ESN2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim39Q9ESN2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim39Q9ESN2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim39Q9ESN2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms