Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa5Q9D7I0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa5Q9D7I0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Gm12821-201ENSMUST00000120022 600 ntBASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Gm6139-201ENSMUST00000079261 882 ntBASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Shisa5Q9D7I0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa5Q9D7I0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Spcs1-204ENSMUST00000226782 949 ntBASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa5Q9D7I0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Gm43173-201ENSMUST00000202246 593 ntBASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shisa5Q9D7I0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa5Q9D7I0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa5Q9D7I0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa5Q9D7I0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.77■□□□□ 0.44
Shisa5Q9D7I0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa5Q9D7I0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa5Q9D7I0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa5Q9D7I0 Notumos-201ENSMUST00000151998 2659 ntBASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shisa5Q9D7I0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 197.9 ms