Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retreg3Q9CQV4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg3Q9CQV4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gm6139-201ENSMUST00000079261 882 ntBASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg3Q9CQV4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg3Q9CQV4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg3Q9CQV4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg3Q9CQV4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retreg3Q9CQV4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms