Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdh15Q99PJ1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
Pcdh15Q99PJ1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh15Q99PJ1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh15Q99PJ1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Pcdh15Q99PJ1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 Gm27275-201ENSMUST00000184318 272 ntBASIC22.78■■□□□ 1.24
Pcdh15Q99PJ1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh15Q99PJ1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Gm13836-201ENSMUST00000121159 501 ntBASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh15Q99PJ1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdh15Q99PJ1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Rab3c-203ENSMUST00000224180 967 ntBASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh15Q99PJ1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdh15Q99PJ1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdh15Q99PJ1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Pcdh15Q99PJ1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pcdh15Q99PJ1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh15Q99PJ1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh15Q99PJ1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Pcdh15Q99PJ1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 Gm5643-201ENSMUST00000117081 966 ntBASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh15Q99PJ1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Gm715-201ENSMUST00000117865 831 ntBASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Pcdh15Q99PJ1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh15Q99PJ1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms