Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Gm6420-201ENSMUST00000193885 723 ntBASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.38■□□□□ 0.85
Cdh23Q99PF4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Gm6211-202ENSMUST00000167849 925 ntBASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh23Q99PF4 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh23Q99PF4 Gm13146-201ENSMUST00000118508 780 ntBASIC20.35■□□□□ 0.85
Cdh23Q99PF4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdh23Q99PF4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh23Q99PF4 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.35■□□□□ 0.85
Cdh23Q99PF4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh23Q99PF4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cdh23Q99PF4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh23Q99PF4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.34■□□□□ 0.85
Cdh23Q99PF4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh23Q99PF4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh23Q99PF4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh23Q99PF4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Gm10819-201ENSMUST00000099988 561 ntBASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh23Q99PF4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh23Q99PF4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh23Q99PF4 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.29■□□□□ 0.84
Cdh23Q99PF4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms