Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.37■□□□□ 0.69
Prdm9Q96EQ9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm9Q96EQ9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm9Q96EQ9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm9Q96EQ9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prdm9Q96EQ9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm9Q96EQ9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm9Q96EQ9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm9Q96EQ9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.3■□□□□ 0.68
Prdm9Q96EQ9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms