Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Gm7332-201ENSMUST00000118351 454 ntBASIC16.85■□□□□ 0.29
Tram1Q91V04 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.85■□□□□ 0.29
Tram1Q91V04 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tram1Q91V04 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tram1Q91V04 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tram1Q91V04 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tram1Q91V04 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tram1Q91V04 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tram1Q91V04 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tram1Q91V04 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tram1Q91V04 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tram1Q91V04 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Tram1Q91V04 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.82■□□□□ 0.28
Tram1Q91V04 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
Tram1Q91V04 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Golph3-205ENSMUST00000228671 2842 ntBASIC16.82■□□□□ 0.28
Tram1Q91V04 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tram1Q91V04 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Tram1Q91V04 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.82■□□□□ 0.28
Tram1Q91V04 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tram1Q91V04 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tram1Q91V04 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tram1Q91V04 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tram1Q91V04 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tram1Q91V04 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Tram1Q91V04 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.8■□□□□ 0.28
Tram1Q91V04 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tram1Q91V04 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tram1Q91V04 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tram1Q91V04 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.79■□□□□ 0.28
Tram1Q91V04 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.79■□□□□ 0.28
Tram1Q91V04 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tram1Q91V04 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tram1Q91V04 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tram1Q91V04 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tram1Q91V04 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms